#+title: Org-mode Config
#+author: Evie Litherland-Smith
#+email: evie@xenia.me.uk
#+filetags: :emacs:config:org:
#+property: header-args:emacs-lisp :tangle yes :mkdirp yes :results output silent

For reference information, see [[https://orgmode.com][Org-mode website]]

#+begin_src emacs-lisp :results output silent
  (setq org-directory "~/Documents/Org"
        org-default-notes-file (expand-file-name "notes.org" org-directory)
        org-hide-emphasis-markers nil
        org-pretty-entities-include-sub-superscripts t
        org-tags-column 0
        org-outline-path-complete-in-steps nil
        org-return-follows-link t
        org-mouse-1-follows-link t
        org-link-descriptive t
        org-refile-use-outline-path t
        org-refile-allow-creating-parent-nodes t
        org-refile-use-outline-path 'file
        org-refile-targets '((nil . (:maxlevel . 2))))

  ;; Add emacs config files to `org-file-targets'
  ;; Need to make this a bit more flexible at some point
  ;; (add-to-list 'org-refile-targets (list ((locate-user-emacs-file "crafted.org") . (:maxlevel . 1))) t)

  ;; Visually indent org-mode files to a given header level
  (add-hook 'org-mode-hook #'org-indent-mode)

  (use-package org
    :ensure t
    :custom
    (org-babel-load-languages '((emacs-lisp . t)
                                (python . t))))
#+end_src

* Keymaps
#+begin_src emacs-lisp :results output silent
  (keymap-global-set "C-c o ." #'calendar)
  (keymap-global-set "C-c o e" #'org-edit-src-code)
  (keymap-global-set "C-c o a" #'org-agenda)
  (keymap-global-set "C-c o n" #'org-capture)
  (keymap-global-set "C-c o l" #'org-capture-goto-last-stored)
#+end_src

* Capture templates
#+begin_src emacs-lisp :results output silent
  (setq org-capture-templates
        '(("n" "Note" entry
           (file+headline "inbox.org" "Note")
           "* %?")
          ("t" "Task" entry
           (file+headline "inbox.org" "Task")
           "* TODO %?"
           :prepend t)
          ("r" "Reading List" entry
           (file+headline "inbox.org" "Reading List")
           "* %?")
          ("m" "Email Workflow")
          ("mf" "Follow Up" entry (file+olp "mail.org" "Follow Up")
           "* TODO Follow up with %:fromname on %a\nSCHEDULED:%t\nDEADLINE: %(org-insert-time-stamp (org-read-date nil t \"+2d\"))\n\n%i")
          ("mr" "Read Later" entry (file+olp "mail.org" "Read Later")
           "* TODO Read %:subject\nSCHEDULED:%t\nDEADLINE: %(org-insert-time-stamp (org-read-date nil t \"+2d\"))\n\n%a\n\n%i")
          ))
#+end_src

* org-roam
#+begin_src emacs-lisp
  (use-package org-roam
    :ensure t
    :after org
    :diminish
    :bind (("C-c o r i" . org-roam-node-insert)
           ("C-c o r f" . org-roam-node-find)
           ("C-c o r n" . org-roam-capture))
    :custom
    (org-roam-directory (expand-file-name "roam" org-directory))
    (org-roam-node-display-template (concat "${title:*} "
                                            (propertize "${tags:24}" 'face 'org-tag)))
    :config
    (mkdir org-roam-directory t)
    (add-to-list 'display-buffer-alist
                 '("\\*org-roam\\*"
                   (display-buffer-in-side-window)
                   (side . right)
                   (slot . 0)
                   (window-width . 0.33)
                   (window-parameters . ((no-other-window . t)
                                         (no-delete-other-windows . t)))))
    (org-roam-db-autosync-mode +1))
#+end_src
** Capture templates
#+begin_src emacs-lisp
  (with-eval-after-load 'org-roam
    (setq org-roam-capture-templates
          '(("d" "default" plain "%?"
             :target (file+head "${slug}.org"
                                "#+title: ${title}\n#+author: %n")
             :unnarrowed t))))
#+end_src
* org-agenda
#+begin_src emacs-lisp :results output silent
  (setq org-agenda-span 'week
        org-agenda-start-on-weekday 1
        org-agenda-sticky nil
        org-agenda-window-setup 'current-window
        org-agenda-tags-column 0
        org-agenda-todo-ignore-scheduled 'future
        org-agenda-todo-ignore-deadlines 'far
        org-agenda-prefix-format '((agenda . " %-12:c%?-12t% s")
                                   (todo . " %-12:c")
                                   (tags . " %-12:c")
                                   (search . " %-12:c"))
        org-agenda-files (list (expand-file-name org-directory)))

  (add-to-list 'org-refile-targets '(org-agenda-files . (:maxlevel . 2)) t)
#+end_src

** Mobile agenda integration
Better syncing to mobile, for use with [[https://github.com/orgzly-revived/orgzly-android-revived][Orgzly]].
#+begin_src emacs-lisp
  (with-eval-after-load 'org
    (setq org-mobile-directory "~/.orgmobile/"
          org-mobile-agendas nil
          org-mobile-files '(org-agenda-files)
          org-mobile-inbox-for-pull (expand-file-name "inbox.org" org-directory)
          org-mobile-force-id-on-agenda-items nil)
    (add-hook 'org-capture-finalize-hook #'org-mobile-push))
#+end_src

* org-alert
#+begin_src emacs-lisp
  (use-package org-alert
    :ensure t
    :after alert
    :config
    (setq org-alert-notification-title "org-mode agenda"
          org-alert-notify-cutoff 30
          org-alert-notify-after-event-cutoff 5)
    (org-alert-enable))
#+end_src
* org-journal
#+begin_src emacs-lisp :results output silent
  (use-package org-journal
    :bind (("C-c o j" . org-journal-new-entry))
    :custom
    (org-journal-dir (expand-file-name "journal" org-directory))
    (org-journal-file-type 'monthly)
    (org-journal-file-format "%Y-%m.org"))
#+end_src
* org-noter
#+begin_src emacs-lisp
  (use-package org-noter
    :ensure t
    :diminish
    :after (org doc-view)
    :commands (org-noter)
    :custom
    (org-noter-always-create-frame nil)
    (org-noter-kill-frame-at-session-end nil)
    (org-noter-auto-save-last-location t)
    (org-noter-default-notes-file-names '("notes.org"))
    (org-noter-doc-property-in-notes t)
    (org-noter-notes-search-path (list
                                  (expand-file-name org-directory)
                                  (expand-file-name "~/Documents/References/library/")))
    (org-noter-prefer-root-as-file-level nil))
#+end_src

* citar
#+begin_src emacs-lisp :results output silent
  (use-package citar
    :ensure t
    :diminish
    :custom
    (org-cite-global-bibliography '("~/Documents/References/main.bib"))
    (org-cite-insert-processor 'citar)
    (org-cite-follow-processor 'citar)
    (org-cite-activate-processor 'citar)
    (citar-bibliography org-cite-global-bibliography)
    (citar-library-paths '("~/Documents/References/library/"))
    (citar-notes-paths '("~/Documents/References/notes/"))
    :hook
    (LaTeX-mode . citar-capf-setup)
    (org-mode . citar-capf-setup)
    :bind (("C-c o c" . citar-open)
           :map org-mode-map :package org
           ("C-c o C-c" . #'org-cite-insert))
    :config
    (require 'citar-embark)
    (defvar citar-indicator-files-icons
      (citar-indicator-create
       :symbol (nerd-icons-octicon
                "nf-oct-file"
                :face 'nerd-icons-green
                :v-adjust -0.1)
       :function #'citar-has-files
       :padding "  " ; need this because the default padding is too low for these icons
       :tag "has:files"))
    (defvar citar-indicator-links-icons
      (citar-indicator-create
       :symbol (nerd-icons-octicon
                "nf-oct-link"
                :face 'nerd-icons-orange
                :v-adjust 0.01)
       :function #'citar-has-links
       :padding "  " ; need this because the default padding is too low for these icons
       :tag "has:links"))
    (defvar citar-indicator-notes-icons
      (citar-indicator-create
       :symbol (nerd-icons-octicon
                "nf-oct-note"
                :face 'nerd-icons-blue
                :v-adjust -0.3)
       :function #'citar-has-notes
       :padding "  " ; need this because the default padding is too low for these icons
       :tag "has:notes"))
    (defvar citar-indicator-cited-icons
      (citar-indicator-create
       :symbol (nerd-icons-octicon
                "nf-oct-circle"
                :face 'nerd-icon-green)
       :function #'citar-is-cited
       :padding "  " ; need this because the default padding is too low for these icons
       :tag "is:cited"))
    (setq citar-indicators (list citar-indicator-files-icons
                                 citar-indicator-links-icons
                                 citar-indicator-notes-icons
                                 citar-indicator-cited-icons)))
#+end_src

** Citar Embark integration
#+begin_src emacs-lisp
  (use-package citar-embark
    :ensure t
    :diminish
    :after (citar embark)
    :init
    (citar-embark-mode +1))
#+end_src

* LaTeX
#+begin_src emacs-lisp
  (setq org-latex-compiler "lualatex")
  (setq org-preview-latex-default-process 'dvisvgm)
#+end_src